An outlook into ultra-scale visualization of large-scale biological data

Nagiza F. Samatova; Paul Breimyer; William Hendrix; Matthew C. Schmidt; Theresa Marie Rhyne

doi:10.1109/ULTRAVIS.2008.5154061

An outlook into ultra-scale visualization of large-scale biological data

Nagiza F. Samatova, Paul Breimyer, William Hendrix, Matthew C. Schmidt, Theresa Marie Rhyne

Department of Computer Science

North Carolina State University

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

6 Scopus citations

Abstract

As bioinformatics has evolved from a reductionistic approach to a complementary multi-scale integrative approach, new challenges in ultra-scale visualization have arisen. Even though visualization is a critical component to large-scale biological data analysis, the ultra-scale nature of systems biology has given rise to novel problems in visualization that are not addressed by existing methods. Visualization is a rich and actively researched domain, and there are many open research questions pertaining to the increasing demands of visualization in bioinformatics. In this paper, we present several broadly important ultra-scale visualization challenges and discuss specific examples of ultra-scale applications in systems biology.

Original language	English
Title of host publication	2008 Workshop on Ultrascale Visualization, UltraVis 2008
Pages	29-39
Number of pages	11
DOIs	https://doi.org/10.1109/ULTRAVIS.2008.5154061
State	Published - 2008
Event	2008 Workshop on Ultrascale Visualization, UltraVis 2008 - Austin, TX, United States Duration: 16 Nov 2008 → 16 Nov 2008

Publication series

Name	2008 Workshop on Ultrascale Visualization, UltraVis 2008

Conference

Conference	2008 Workshop on Ultrascale Visualization, UltraVis 2008
Country/Territory	United States
City	Austin, TX
Period	16/11/08 → 16/11/08

Keywords

Bioinformatics
Large-scale biological data
Ultra-scale visualization
Visualization challenges

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10.1109/ULTRAVIS.2008.5154061

Cite this

@inproceedings{0ea5f11988d34498866fa6634052e69e,

title = "An outlook into ultra-scale visualization of large-scale biological data",

abstract = "As bioinformatics has evolved from a reductionistic approach to a complementary multi-scale integrative approach, new challenges in ultra-scale visualization have arisen. Even though visualization is a critical component to large-scale biological data analysis, the ultra-scale nature of systems biology has given rise to novel problems in visualization that are not addressed by existing methods. Visualization is a rich and actively researched domain, and there are many open research questions pertaining to the increasing demands of visualization in bioinformatics. In this paper, we present several broadly important ultra-scale visualization challenges and discuss specific examples of ultra-scale applications in systems biology.",

keywords = "Bioinformatics, Large-scale biological data, Ultra-scale visualization, Visualization challenges",

author = "Samatova, {Nagiza F.} and Paul Breimyer and William Hendrix and Schmidt, {Matthew C.} and Rhyne, {Theresa Marie}",

year = "2008",

doi = "10.1109/ULTRAVIS.2008.5154061",

language = "English",

isbn = "9781424428618",

series = "2008 Workshop on Ultrascale Visualization, UltraVis 2008",

pages = "29--39",

booktitle = "2008 Workshop on Ultrascale Visualization, UltraVis 2008",

note = "2008 Workshop on Ultrascale Visualization, UltraVis 2008 ; Conference date: 16-11-2008 Through 16-11-2008",

}

Samatova, NF, Breimyer, P, Hendrix, W, Schmidt, MC & Rhyne, TM 2008, An outlook into ultra-scale visualization of large-scale biological data. in 2008 Workshop on Ultrascale Visualization, UltraVis 2008., 5154061, 2008 Workshop on Ultrascale Visualization, UltraVis 2008, pp. 29-39, 2008 Workshop on Ultrascale Visualization, UltraVis 2008, Austin, TX, United States, 16/11/08. https://doi.org/10.1109/ULTRAVIS.2008.5154061

An outlook into ultra-scale visualization of large-scale biological data. / Samatova, Nagiza F.; Breimyer, Paul; Hendrix, William et al.
2008 Workshop on Ultrascale Visualization, UltraVis 2008. 2008. p. 29-39 5154061 (2008 Workshop on Ultrascale Visualization, UltraVis 2008).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

TY - GEN

T1 - An outlook into ultra-scale visualization of large-scale biological data

AU - Samatova, Nagiza F.

AU - Breimyer, Paul

AU - Hendrix, William

AU - Schmidt, Matthew C.

AU - Rhyne, Theresa Marie

PY - 2008

Y1 - 2008

N2 - As bioinformatics has evolved from a reductionistic approach to a complementary multi-scale integrative approach, new challenges in ultra-scale visualization have arisen. Even though visualization is a critical component to large-scale biological data analysis, the ultra-scale nature of systems biology has given rise to novel problems in visualization that are not addressed by existing methods. Visualization is a rich and actively researched domain, and there are many open research questions pertaining to the increasing demands of visualization in bioinformatics. In this paper, we present several broadly important ultra-scale visualization challenges and discuss specific examples of ultra-scale applications in systems biology.

AB - As bioinformatics has evolved from a reductionistic approach to a complementary multi-scale integrative approach, new challenges in ultra-scale visualization have arisen. Even though visualization is a critical component to large-scale biological data analysis, the ultra-scale nature of systems biology has given rise to novel problems in visualization that are not addressed by existing methods. Visualization is a rich and actively researched domain, and there are many open research questions pertaining to the increasing demands of visualization in bioinformatics. In this paper, we present several broadly important ultra-scale visualization challenges and discuss specific examples of ultra-scale applications in systems biology.

KW - Bioinformatics

KW - Large-scale biological data

KW - Ultra-scale visualization

KW - Visualization challenges

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DO - 10.1109/ULTRAVIS.2008.5154061

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SN - 9781424428618

T3 - 2008 Workshop on Ultrascale Visualization, UltraVis 2008

SP - 29

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BT - 2008 Workshop on Ultrascale Visualization, UltraVis 2008

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Y2 - 16 November 2008 through 16 November 2008

ER -

An outlook into ultra-scale visualization of large-scale biological data

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Keywords

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