TY - JOUR
T1 - Computational Mechanistic Investigation of Biocatalytic C(sp3)–H Insertions with Monosubstituted Carbenes via Engineered Heme Proteins
AU - Chu, Jia Min
AU - McGuire, Emily
AU - Zhang, Yong
N1 - Publisher Copyright:
© 2025 The Authors. Published by American Chemical Society
PY - 2025/7/15
Y1 - 2025/7/15
N2 - A recent experimental study by Arnold’s research group (Nature 2019, 565, 67–72) showed the engineered cytochrome P450 enzyme (cytochrome P411), with acceptor-only carbenes, offers a new sustainable alternative to metal catalysts that have traditionally dominated C–H functionalization. However, there is still no detailed mechanistic understanding thus far. In this study, a series of DFT calculations were performed to uncover the basic reaction mechanism as well as insights into the observed carbene substituent effect behind this novel reaction. Computational results showed that the reaction follows the radical hydrogen atom transfer (HAT) mechanism, which is consistent with experimental work. The electron-withdrawing carbene substituent together with the negatively charged axial ligand plays an important role in steering the reaction toward this mechanism. The more favorable experimental reactivity with the carbene derived from ethyl diazoacetate than diazoacetone was also reproduced. It was found to originate from the additional hydrogen bonds with the carboxylate substituent of the carbene, which further stabilizes the transition state toward a more facile HAT reaction. This quantum chemical study provides useful molecular-level insights that help shed light on the future design of the biocatalysts to contribute to the development of efficient, sustainable C–H functionalization approaches.
AB - A recent experimental study by Arnold’s research group (Nature 2019, 565, 67–72) showed the engineered cytochrome P450 enzyme (cytochrome P411), with acceptor-only carbenes, offers a new sustainable alternative to metal catalysts that have traditionally dominated C–H functionalization. However, there is still no detailed mechanistic understanding thus far. In this study, a series of DFT calculations were performed to uncover the basic reaction mechanism as well as insights into the observed carbene substituent effect behind this novel reaction. Computational results showed that the reaction follows the radical hydrogen atom transfer (HAT) mechanism, which is consistent with experimental work. The electron-withdrawing carbene substituent together with the negatively charged axial ligand plays an important role in steering the reaction toward this mechanism. The more favorable experimental reactivity with the carbene derived from ethyl diazoacetate than diazoacetone was also reproduced. It was found to originate from the additional hydrogen bonds with the carboxylate substituent of the carbene, which further stabilizes the transition state toward a more facile HAT reaction. This quantum chemical study provides useful molecular-level insights that help shed light on the future design of the biocatalysts to contribute to the development of efficient, sustainable C–H functionalization approaches.
UR - https://www.scopus.com/pages/publications/105009862224
UR - https://www.scopus.com/pages/publications/105009862224#tab=citedBy
U2 - 10.1021/acsomega.5c02412
DO - 10.1021/acsomega.5c02412
M3 - Article
AN - SCOPUS:105009862224
VL - 10
SP - 29365
EP - 29373
JO - ACS Omega
JF - ACS Omega
IS - 27
ER -