TY - JOUR
T1 - MGNN-bw
T2 - Multi-Scale Graph Neural Network Based on Biased Random Walk Path Aggregation for ASD Diagnosis
AU - Pan, Wenqiu
AU - Ling, Guang
AU - Liu, Feng
N1 - Publisher Copyright:
© 2001-2011 IEEE.
PY - 2025
Y1 - 2025
N2 - In recent years, computationally assisted diagnosis for classifying autism spectrum disorder (ASD) and typically developing (TD) individuals based on neuroimaging data, such as functional magnetic resonance imaging (fMRI), has garnered significant attention. Studies have shown that long-range functional connectivity patterns in ASD patients exhibit significant abnormalities, and individual brain networks display considerable heterogeneity. However, current graph neural networks (GNNs) used in ASD research have failed to adequately capture long-range connectivity and have overlooked individual differences. To address these limitations, this study proposes a novel multi-scale graph neural network based on biased random walks (mGNN-bw). The model introduces a co-optimization strategy between sub-models and the main model, leveraging node pooling scores from sub-models to guide biased random walks, effectively capturing long-range connectivity. By constructing high-order brain networks through path encoding and aggregation, and integrating them with low-order brain networks based on Pearson correlation, the model achieves a robust multi-scale feature representation. Experimental results on the publicly available ABIDE I dataset demonstrate the superior performance of our approach, achieving accuracy rates of 74.8% and 73.2% using CC200 and AAL atlases, respectively, outperforming existing methods. Additionally, the model identifies key ASD-associated brain regions, including the frontal lobe, insula, cingulate, and calcarine, supported by existing research. The proposed method significantly contributes to the clinical diagnosis of ASD.
AB - In recent years, computationally assisted diagnosis for classifying autism spectrum disorder (ASD) and typically developing (TD) individuals based on neuroimaging data, such as functional magnetic resonance imaging (fMRI), has garnered significant attention. Studies have shown that long-range functional connectivity patterns in ASD patients exhibit significant abnormalities, and individual brain networks display considerable heterogeneity. However, current graph neural networks (GNNs) used in ASD research have failed to adequately capture long-range connectivity and have overlooked individual differences. To address these limitations, this study proposes a novel multi-scale graph neural network based on biased random walks (mGNN-bw). The model introduces a co-optimization strategy between sub-models and the main model, leveraging node pooling scores from sub-models to guide biased random walks, effectively capturing long-range connectivity. By constructing high-order brain networks through path encoding and aggregation, and integrating them with low-order brain networks based on Pearson correlation, the model achieves a robust multi-scale feature representation. Experimental results on the publicly available ABIDE I dataset demonstrate the superior performance of our approach, achieving accuracy rates of 74.8% and 73.2% using CC200 and AAL atlases, respectively, outperforming existing methods. Additionally, the model identifies key ASD-associated brain regions, including the frontal lobe, insula, cingulate, and calcarine, supported by existing research. The proposed method significantly contributes to the clinical diagnosis of ASD.
KW - Autism spectrum disorder (ASD)
KW - brain network analysis
KW - diagnosis
KW - graph neural network (GNN)
KW - multi-scale representations
UR - http://www.scopus.com/inward/record.url?scp=85218743073&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85218743073&partnerID=8YFLogxK
U2 - 10.1109/TNSRE.2025.3543177
DO - 10.1109/TNSRE.2025.3543177
M3 - Article
C2 - 40031443
AN - SCOPUS:85218743073
SN - 1534-4320
VL - 33
SP - 900
EP - 910
JO - IEEE Transactions on Neural Systems and Rehabilitation Engineering
JF - IEEE Transactions on Neural Systems and Rehabilitation Engineering
ER -